
How to clean a chicken coop is something every chicken keeper needs to know to keep a flock healthy and happy. Just as you wash the dishes or dust the living room regularly, routinely cleaning the coop will help prevent common health concerns in your flock.
Knowing some cleaning tips can save you time cleaning your coop. So, grab a pitchfork, a bottle brush and a broom, and let’s start cleaning!
Key Takeaways
- Learning how to clean a chicken coop is essential for preventing disease and maintaining a healthy flock.
- Remove soiled bedding from the coop and nesting boxes weekly instead of allowing manure to accumulate.
- Use clean, dry bedding such as straw to help keep the coop sanitary and comfortable.
- Wash waterers and feeders regularly to prevent the buildup of dirt, bacteria and algae.
- Inspect and clean the chicken run daily by removing spilled feed, eggs and food scraps that can attract rodents and predators.
- Consistent coop maintenance takes only a few minutes each week and can help prevent many common chicken health problems.
Chicken Coop Cleaning Tools You’ll Need
Cleaning the coop for our chickens starts with having the proper tools to do the job quickly and efficiently. To do that, you will need the following:
- Pitchfork to fork out soiled bedding
- Trash can or wheelbarrow for hauling away old straw, wood shavings, etc.
- Broom and dustpan for sweeping out dust and removing cobwebs
- Trowel to scoop out nesting box material
- Ice scraper to scrape dried manure off the coop floor
- Bottle brush to scrub waterers and feeders
- Facemask to protect against dust and other particles that can irritate your respiratory tract
Why Deep Litter Can Make Cleaning More Difficult
The deep litter method has been practiced in backyard flocks for centuries. This method of cleaning the coop consists of removing the bedding soiled by chickens once or twice a year. Instead of removing the manure, chicken keepers place more straw or wood shavings on top.
The manure will break down throughout the year and become a perfect fertilizer, ready for the garden. The old bedding is often placed in the garden to overwinter and break down to provide nutrient-rich soil for next year’s vegetables.
Yes, this may sound ideal for the gardener and flock owner. But the deep litter method can also cause some health issues for the flock.
Chicken manure breaks down into particles of dust. These particles can irritate the respiratory tract, so experts advise wearing a mask over your nose and mouth when handling chicken manure. Not only is this dust harmful to you, but it is also harmful to your chickens. And the dust from manure breakdown can cause respiratory issues in the flock as they scratch through the bedding, causing illness and even death in chickens.
The deep litter method is also known for harboring bacteria, fungi and diseases such as coccidiosis, as well as external and internal parasites. Never use the deep litter method housing hens five years or older, as these aging ladies’ immune systems may no longer be able to handle the bacteria often found in deep litter.
So what should you do instead? Remove all the bedding from the coop floor and nesting boxes weekly to keep your coop clean and chickens healthy. Depending on the size of your enclosure, this will only take a couple of minutes. Trust me, the rewards of a clean coop are worth the time it takes to clean it.

Erin Snyder
Choosing the Best Bedding for a Clean Chicken Coop
Selecting a bedding can be tricky as there are many options. Chicken keepers have many preferences, from straw and hay to sand or wood shavings.
There are some pros and cons to each bedding type. In my experience, straw has been the best option for my flock, as it is easy to fork out, while other beddings (wood shavings and sand) can be difficult and more time-consuming. Straw is less likely to cause a crop impaction than sand or shavings and will provide hens with hours of fun and foraging as they search for remaining seed heads to snack on.
Hay is generally considered not the best bedding option for backyard flocks. Unlike straw, hay is expensive to purchase, is more likely to grow mold, and carries a greater risk of combustion.
Because of these safety concerns, avoid using hay as bedding whenever possible.

Erin Snyder
How to Clean Chicken Waterers
Cleaning waterers should be a part of your daily routine. Waterers should be emptied, rinsed and refilled with fresh drinking water twice daily.
But I also like to clean mine more thoroughly once a week as my hens enjoy filling them up with dirt as they happily scratch or dust bathe nearby. I use a drop of dish detergent, hot water and a bottle brush (that I only use on my chicken waterers) to clean them quickly and efficiently.
Always be sure to rinse thoroughly before refilling.

Erin Snyder
How to Clean Chicken Feeders
How to clean a chicken coop also means cleaning the chicken feeders. This can be a complex process. So, several years ago, I switched from a hanging poultry feeder to rubber feed pans. These feed pans are easy to clean, and you can add or remove the number of pans as your flock dwindles or grows.
Fill feeders twice daily with as much food as your chickens will eat in 20 minutes. Empty remaining food and rinse feeders at least once (preferably twice) daily. Wash feeders weekly in hot, sudsy water and thoroughly rinse before returning them to the flock. Always be sure feeders have dried before refilling them by placing them in a well-ventilated dry area or on a porch in the sun.
How to Clean the Chicken Run
Knowing how to clean a chicken coop also means cleaning the run — an oft-overlooked daily task. Check the run and remove spilled food, freshly laid eggs or leftover table scraps to deter predators and rodents from trying to enter the coop or run.
You can also use this time to check for any signs (holes in wire mesh or digging) of predators trying to gain access.
Regularly cleaning the coop, run, waterers and feeders may seem like a lot of work, but it is one of the best ways to keep your chickens healthy and happy.
Frequently Asked Questions
How often should you clean a chicken coop?
For most backyard flocks, remove soiled bedding from the coop and nesting boxes once a week. Waterers and feeders should be rinsed daily and thoroughly cleaned weekly. The run should be checked daily for spilled feed, eggs and food scraps.
What is the best bedding for a chicken coop?
Many chicken keepers use straw, wood shavings or sand. Straw is a popular option because it is easy to remove, encourages natural foraging behavior and is less likely to cause crop issues than some other bedding materials.
Is the deep litter method safe for chickens?
While many flock owners successfully use the deep litter method, it can increase the buildup of dust, bacteria, fungi and parasites if not managed carefully. Regular bedding removal and replacement is often the simplest way to maintain a clean and healthy coop environment.
How do you clean chicken waterers?
Empty the waterer, rinse it thoroughly and refill it with fresh water daily. Once a week, scrub the waterer with hot water, a small amount of dish detergent and a bottle brush before rinsing thoroughly.
How do you clean chicken feeders?
Remove old feed, wash feeders with hot, soapy water and allow them to dry completely before refilling. Regular cleaning helps prevent mold, bacteria and feed contamination.
Why is cleaning the chicken run important?
A clean run helps reduce pests, rodents and predators. Removing spilled feed, leftover treats and eggs daily also helps keep the flock healthier and makes it easier to spot signs of predator activity.
Final Thoughts
Regular coop maintenance doesn’t have to be time-consuming. By removing soiled bedding, cleaning feeders and waterers, and keeping the run tidy, you can create a healthier environment for your flock while reducing the risk of disease, parasites and predators. Knowing how to clean a chicken coop properly is one of the most important skills a chicken keeper can learn, and a consistent cleaning routine will help keep your chickens comfortable, productive and thriving year-round.
This article about how to clean a chicken coop was written for Hobby Farms magazine online. Click here to subscribe.





